Browse of TCMCG013C21598 protein

CDS

Accession Number	TCMCG013C21598
gbkey	CDS
Protein Id	XP_015386909.1
Location	join(14518046..14518214,14518630..14518844,14519969..14520109,14520215..14520388,14521134..14521233,14521815..14521933,14522040..14522162,14522271..14522342,14523151..14523243,14523899..14524012,14524111..14524233,14525340..14525525,14525644..14525718,14527073..14527209,14528158..14528292,14528699..14528844,14528990..14529055,14529551..14529657,14529790..14529870,14529979..14530053,14530151..14530252,14531278..14531446,14531521..14531669,14531868..14531951,14532032..14532132,14532380..14532530,14532820..14532894,14533040..14533193,14533689..14534325,14535411..14535471,14536180..14536325,14536399..14536582,14536977..14537075,14537318..14537694,14537785..14537961,14538883..14538979,14539077..14539232,14539319..14539549,14539634..14539717,14539827..14539934)
Gene	LOC102625636
GeneID	102625636
Organism	Citrus sinensis

Protein

Length	1930aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA225998
db_source	XM_015531423.2
Definition	rRNA biogenesis protein RRP5 isoform X2 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGCTTCTTCTAGGAAATCACAGAAGAAAAGCTCCAAAGACGGTCCGAAATTTAACAAAGCATCAAAGAATCAGTTTAAAAACTCAAAGAAGCAGATAAACGACGCCGTCGAGGCTCAAGACCTCGCTTTGCCGCCTGACGACGATGTCCCTGTCTTTCCCCGAGGCGGGGGACATTCTTTGACTCAGAGAGAGCGGGATGAAATCCATGCAGAAGTTGACGCCGAATTTGAGGCAGCGGAGAGAGGCTTACATAAGAAGAATAAGAAGAAGAAGAAGACGGAGAGAAAGGCCAATGAAACCGTTGATGATTTGGGTTCACTTTTTGGCGATGGTATTTCTGGAAAACTTCCTAGATATGCTAATAAGATTACTTTGAAGAATATTTCTGCGGGAATGAAGCTTTGGGGAGTTGTTGCTGAAGTGAATGAGAAAGACCTTGTAATTTGTCTTCCAGGGGGCCTACGAGGATTAGCTCGTGCCGCTGATGCGCTTGATCCTATTTTAGATAATGAAATTGAGGCCAATGAAGACAATCTCCTTCCGACGATATTCCACGTTGGACAGCTGGTATCTTGCATAGTTTTGCAGTTGGATGATGACAAGAAAGAGATTGGGAAACGAAAAATCTGGCTTTCTTTGCGTCTTTCTTTGTTGTACAAAGGTCTTAGCTTGGAAACTGTTCAGGAGGGGATGGTCCTCACTGCATATGTCAAGAGCATTGAAGATCATGGCTACATTCTTCATTTTGGATTGCCTTCTTTTACAGGGTTTTTGCCAAGAAACAACTTAGCTGAAAACAGTGGGATTGATGTGAAGCCAGGGCTACTTTTACAAGGGGTGGTTAGAAGCATTGATAGAACTCGTAAAGTGGTTTACCTGAGTTCTGATCCAGATACAGTGTCGAAATGTGTTACAAAGGATCTTAAAGGTATTTCAATTGATCTTCTAGTTCCAGGCATGATGGTCACTGCTCGCGTACAGTCAATACTTGAAAATGGAGTTATGCTATCGTTTCTTACATACTTCACTGGAACTGTTGATATATTTCATTTACAAAATACATTCCCAACAACAAATTGGAAGAATGACTACAATCAACATAAGAAGGTCAACGCTCGTATATTGTTCGTTGATCCCACAAGCAGAGCAGTTGGTTTGACCTTGAATCCTTATCTTCTTCACAACAGAGCTCCTCCTTCTCATGTTAAAGTTGGAGATATCTATGACCAGTCAAAAGTGGTCAGGGTTGATAGAGGGTTGGGCCTTCTGCTTGACATCCCATCAACCCCTGTGTCAACACCGGCATACGTCACTATATCTGATGTTGCTGAAGAGGAAGTAAGGAAGCTGGAAAAGAAGTACAAAGAAGGTAGCTATGTTCGTGTCCGAATTCTTGGATTTAGGCACTTGGAGGGGCTTGCAACCGGGATTCTGAAGGCCAGTGCTTTTGAAGGACTAGTGTTCACCCACTCTGATGTCAAGCCAGGGATGGTGGTGAAGGGTAAAGTTATAGCTGTTGATAGCTTTGGTGCTATTGTGCAATTTCCTGGTGGTGTGAAGGCACTCTGTCCGCTCCCACATATGTCCGAATTTGAAATTGTGAAGCCTGGAAAAAAATTTAAGGTTGGAGCTGAACTGGTGTTCCGAGTGCTTGGTGTTAAATCTAAGAGAATTACTGTTACACATAAGAAAACTCTTGTGAAATCAAAGCTTGCAATTTTGAGTTCATATGCTGAAGCAACCGACGGATTAATAACACATGGATGGATAACGAAGATTGAAAAACACGGTTGCTTTGTCCGGTTCTACAATGGAGTCCAAGGATTTGCTCCGAGATCTGAACTTGGATTAGATCCAGGATGTGAACCAAGTTCCATGTATCATGTTGGGCAAGTCGTGAAATGCAGAATAATGAGTTCCATTCCTGCTTCACGGCGGATCAACCTCAGTTTCATGATGAAGCCTACAAGGGTTTCCGAAGATGATTTGGTCAAGTTGGGTAGCCTTGTTTCTGGAGTTGTTGATGTGGTAACCCCAAATGCAGTAGTTGTCTATGTTATCGCAAAAGGTTACTCAAAGGGTACAATTCCTACTGAACATTTGGCAGATCACCTTGAGCATGCTACCGTGATGAAGTCAGTCATAAAGCCTGGATATGAGTTTGATCAGCTGTTGGTCCTAGACAATGAGAGCAGCAACTTGTTACTGTCTGCAAAATATTCTCTAATCAACTCGGCTCAACAGCTTCCTTCTGATGCCAGTCATATCCACCCTAATTCAGTTGTCCATGGGTATGTTTGCAACATAATTGAAACTGGCTGCTTTGTTCGGTTTCTTGGGCGCTTGACGGGCTTTGCTCCTAGAAGCAAGGCAGTGGATGGCCAAAGAGCTGATCTTTCAAAAACTTATTACGTTGGGCAATCTGTTCGCAGCAATATACTCGATGTCAATAGTGAAACGGGTAGAATAACACTGAGTTTAAAGCAGTCCTGCTGTTCTTCGACAGATGCATCCTTTATGCAAGAGTACTTTCTGTTGGAAGAGAAGATTGCTATGCTGCAATCCTCGAAACATAATGGATCAGAGTTAAAATGGGTTGAAGGATTTATCATTGGCAGTGTCATTGAGGGAAAGGTTCATGAGTCAAATGATTTTGGAGTTGTTGTCAGCTTTGAGGAACACAGTGATGTTTATGGATTTATTACTCATCATCAGTTAGCTGGAGCTACCGTGGAAAGTGGATCTGTCATTCAGGCTGCCATTCTTGATGTTGCCAAGGCAGAACGCCTTGTTGATTTATCGTTAAAAACGGTGTTCATTGACAGATTTAGGGAAGCAAATTCTAACAGGCAGGCTCAGAAGAAGAAACGCAAAAGAGAAGCTTCCAAGGACTTGGAAGTGCATCAGACAGTAAATGCAATTGTGGAGATTGTGAAAGAGAATTACTTGGTTCTTTCGTTGCCAGAGTATAACTATTCTATAGGATATGCATCTGTGTCAGATTATAACACACAAAAGTTCCCTCAGAAACAATTTCTGAATGGACAAAGTGTCATTGCTACAGTTATGGCTCTTCCAAGCTCTTCAACTGCTGGGAGATTACTTTTACTTCTTAAAGCTATTAGTGAGACTGAGACATCCAGTTCCAAAAGGGCAAAAAAGAAGTCTAGCTATGATGTTGGATCTTTAGTTCAGGCAGAGATCACTGAAATTAAGCCCTTGGAGCTAAGATTGAAATTTGGAATTGGTTTTCATGGGCGGATTCACATAACAGAGGTGAACGATGATAAGAGTAATGTGGTGGAAAACCTATTCAGCAACTTCAAAATTGGGCAGACAGTGACAGCAAGGATCATAGCCAAGTCCAATAAACCAGACATGAAAAAAAGCTTCCTGTGGGAGCTGTCCATCAAACCCTCAATGCTTACGGGGAGCAAGCTTTTGTTTGAAGAATGTGATGTTTCAATTGGACAACGTGTCACCGGTTATGTATATAAAGTGGACAATGAATGGGCATTGTTAACAATATCTCGACATTTGAAGGCTCAGCTTTTCATTCTTGATAGTGCATATGAGCCTAGTGAACTTCAAGAATTCCAAAGGCGCTTTCATATCGGAAAAGCTGTTACTGGTCATGTTTTAAGTATTAATAAGGAGAAGAAACTGTTGCGCTTAGTGCTACGGCCTTTTCAGGATGGAATAAGCGATAAGACAGTTGATATTTCAAATGATAATATGCAAACCTTTATACATGAAGGAGATATTGTGGGTGGTAGAATTTCCAAAATACTTTCAGGTGTTGGTGGATTGGTCGTGCAAATTGGTCCTCATTTGTATGGTAGGGTTCATTTCACTGAACTCAAAAACATATGTGTGTCTGACCCATTGTCTGGATATGATGAAGGCCAGTTTGACCCATTGTCTGGATATGATGAAGGCCAGTTTGTCAAATGCAAGGTCCTTGAAATCAGTCGCACGGTCAGGGGCACTTTTCATGTTGAGCTGTCTCTACGCTCATCTTTAGATGGCATGAGCAGTACGAATTCTTCAGATCTCTCTACTGATGTGGATACTCCTGGCAAGCATTTGGAAAAGATTGAGGATCTTTCTCCTAATATGATTGTACAGGGTTATGTTAAGAATGTGACATCTAAAGGATGTTTTATTATGCTCTCACGGAAGCTTGATGCAAAAGTTCTCCTTTCAAATCTGTCAGATGGATATGTGGAAAGTCCAGAAAAAGAGTTTCCTATTGGGAAACTTGTAGCTGGCAGGGTGCTATCCGTGGAGCCTTTGTCAAAGCGCGTTGAGGTTACCTTGAAGACATCCGATTCTAGGACTGCTTCCCAATCTGAAATCAATAATTTGAGTAATCTACATGTTGGAGACATTGTTATTGGGCAGATCAAGCGGGTGGAATCATATGGTTTGTTCATCACAATTGAGAACACGAACTTGGTTGGATTATGCCACGTTTCAGAGCTTTCAGAAGACCATGTTGACAACATTGGGACTATATACAGAGCCGGGGAGAAAGTTAAGGTGAAGATTTTGAAGGTGGACAAAGAAAAGCGCCGAATTTCACTGGGAATGAAGAGTTCGTATTTTAAGAATGATGCTGATAACCTTCAAATGTCTTCAGAAGAAGAGTCTGATGAAGCCATTGAAGAAGTTGGTTCTTATAACAGGTCATCATTATTGGAGAACAGTTCAGTTGCTGTTCAAGATATGGATACGGAGTCTGAAGATGGAGGATCTCTGGTTCTTGCTCAAATAGAGTCTAGGGCTTCCGTTCCTCCTCTTGAGGTCAATCTTGATGATGAGCAGCCTGACATGGATAATGGAATTAGTCAAAATCAGGGACATACTGATGAGGCAAAAACCATAGATGAGAAGAACAATCGACATGCAAAGAAGAAGGAGAAGGAAGAGAGGGAGCAAGAAATAAGAGCTGCTGAGGAAAGGTTGCTGGAAAAGGATGCACCAAGAACTCCTGATGAATTTGAGAGGCTGGTCAGGAGTTCCCCAAATAGCAGTTTTGTTTGGATAAAGTACATGGCTTTCATGCTCTCCATGGCTGATGTTGAGAAAGCCCGCTCTATTGCTGAAAGGGCTCTACAAACTATTAACATTCGAGAAGAGAATGAGAAGCTAAATATTTGGGTGGCTTATTTTAATTTGGAAAATGAATATGGAAATCCACCAGAGGAAGCTGTTGTAAAAGTATTTCAAAGAGCATTACAATATTGTGATCCCAAAAAGGTCCATTTGGCACTGTTGGGTTTGTATGAAAGGACTGAGCAAAATAAGTTGGCTGATGAGCTTCTTTACAAAATGATCAAGAAATTCAAGCATTCGTGCAAGGTCTGGTTAAGGAGGGTGCAGAGACTTTTGAAGCAACAGCAGGAGGGGGTTCAGGCTGTGGTGCAACGTGCTTTGTTAAGTCTTCCTCGGCATAAGCATATTAAATTCATCTCACAGACAGCTATTCTCGAGTTCAAAAATGGGGTTGCTGATAGAGGGCGATCCATGTTTGAGGGAATCTTAAGTGAATATCCAAAGAGAACAGACTTGTGGAGTATTTATCTTGATCAAGAGATTCGACTTGGAGACGTAGATTTAATTCGTGGATTGTTTGAGAGGGCTATCAGCTTGAGTCTCCCACCTAAAAAGATGAAATTCTTATTTAAGAAGTATCTTGAGTATGAAAAATCTCTTGGTGAGGAAGAAAGGATTGAATATGTGAAACAGAAAGCAATGGAGTATGTCGAGAGTACACTAGCGTAG

Protein:   MAASSRKSQKKSSKDGPKFNKASKNQFKNSKKQINDAVEAQDLALPPDDDVPVFPRGGGHSLTQRERDEIHAEVDAEFEAAERGLHKKNKKKKKTERKANETVDDLGSLFGDGISGKLPRYANKITLKNISAGMKLWGVVAEVNEKDLVICLPGGLRGLARAADALDPILDNEIEANEDNLLPTIFHVGQLVSCIVLQLDDDKKEIGKRKIWLSLRLSLLYKGLSLETVQEGMVLTAYVKSIEDHGYILHFGLPSFTGFLPRNNLAENSGIDVKPGLLLQGVVRSIDRTRKVVYLSSDPDTVSKCVTKDLKGISIDLLVPGMMVTARVQSILENGVMLSFLTYFTGTVDIFHLQNTFPTTNWKNDYNQHKKVNARILFVDPTSRAVGLTLNPYLLHNRAPPSHVKVGDIYDQSKVVRVDRGLGLLLDIPSTPVSTPAYVTISDVAEEEVRKLEKKYKEGSYVRVRILGFRHLEGLATGILKASAFEGLVFTHSDVKPGMVVKGKVIAVDSFGAIVQFPGGVKALCPLPHMSEFEIVKPGKKFKVGAELVFRVLGVKSKRITVTHKKTLVKSKLAILSSYAEATDGLITHGWITKIEKHGCFVRFYNGVQGFAPRSELGLDPGCEPSSMYHVGQVVKCRIMSSIPASRRINLSFMMKPTRVSEDDLVKLGSLVSGVVDVVTPNAVVVYVIAKGYSKGTIPTEHLADHLEHATVMKSVIKPGYEFDQLLVLDNESSNLLLSAKYSLINSAQQLPSDASHIHPNSVVHGYVCNIIETGCFVRFLGRLTGFAPRSKAVDGQRADLSKTYYVGQSVRSNILDVNSETGRITLSLKQSCCSSTDASFMQEYFLLEEKIAMLQSSKHNGSELKWVEGFIIGSVIEGKVHESNDFGVVVSFEEHSDVYGFITHHQLAGATVESGSVIQAAILDVAKAERLVDLSLKTVFIDRFREANSNRQAQKKKRKREASKDLEVHQTVNAIVEIVKENYLVLSLPEYNYSIGYASVSDYNTQKFPQKQFLNGQSVIATVMALPSSSTAGRLLLLLKAISETETSSSKRAKKKSSYDVGSLVQAEITEIKPLELRLKFGIGFHGRIHITEVNDDKSNVVENLFSNFKIGQTVTARIIAKSNKPDMKKSFLWELSIKPSMLTGSKLLFEECDVSIGQRVTGYVYKVDNEWALLTISRHLKAQLFILDSAYEPSELQEFQRRFHIGKAVTGHVLSINKEKKLLRLVLRPFQDGISDKTVDISNDNMQTFIHEGDIVGGRISKILSGVGGLVVQIGPHLYGRVHFTELKNICVSDPLSGYDEGQFDPLSGYDEGQFVKCKVLEISRTVRGTFHVELSLRSSLDGMSSTNSSDLSTDVDTPGKHLEKIEDLSPNMIVQGYVKNVTSKGCFIMLSRKLDAKVLLSNLSDGYVESPEKEFPIGKLVAGRVLSVEPLSKRVEVTLKTSDSRTASQSEINNLSNLHVGDIVIGQIKRVESYGLFITIENTNLVGLCHVSELSEDHVDNIGTIYRAGEKVKVKILKVDKEKRRISLGMKSSYFKNDADNLQMSSEEESDEAIEEVGSYNRSSLLENSSVAVQDMDTESEDGGSLVLAQIESRASVPPLEVNLDDEQPDMDNGISQNQGHTDEAKTIDEKNNRHAKKKEKEEREQEIRAAEERLLEKDAPRTPDEFERLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQTINIREENEKLNIWVAYFNLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGLYERTEQNKLADELLYKMIKKFKHSCKVWLRRVQRLLKQQQEGVQAVVQRALLSLPRHKHIKFISQTAILEFKNGVADRGRSMFEGILSEYPKRTDLWSIYLDQEIRLGDVDLIRGLFERAISLSLPPKKMKFLFKKYLEYEKSLGEEERIEYVKQKAMEYVESTLA